Calc
The Calc server is used for remote computing. Local user accounts are provided therefore. calc.isor.univie.ac.at can be accessed in 2 ways.
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1 Functional Range
Use remote computing @calc for medium large operations. For small Operations use your laptop, for large ones Ivana's cluster. Coordinate with your colleagues, and use gkrellm to monitor system resources. (30% virtualisation-overhead might be indicated)
2 Backup
Your data is your responsibility, since this server is not part of a BACKUP routine. Transfer your data (e.g. code and time-series) back onto your laptop or onto your share of our Institutsserver.)
3 Access
3.1 via Direct Access
3.1.1 Prerequisites
- VPN client (no need within VLAN-168)
- ssh client
- X server
an X server is needed if graphics shall be displayed, staying in text mode you would not need it.
3.1.2 work-flow
Your console (terminal) still controls the session, so if e.g. your laptop runs short on batteries, your calculation is interrupted and lost.
- login at the remote host calc.isor.univie.ac.at
ssh -X <remote_user>@calc.isor.univie.ac.at
the first time you might want to ckeck the host-keys:
a6:b2:e6:b2:69:79:03:2d:dc:a8:32:f3:9d:36:b1:e3 (ECDSA) 31:9a:05:c8:02:83:58:da:4e:3a:92:36:8c:89:29:c4 (RSA)
- make your data available
- either by running a script to connect your vladimir-data
(only if you have got an account at the institutsserver, i.e. being staff)
mount_vladimir <vladimir_user>
- or some secure-copy transfers
scp -r <my_local_data> <remote_user>@calc.isor.univie.ac.at
- start your calculations, e.g
matlab
- transfer your outcome and delete your original data (if you don't use it any more)
or disconnect from vladimir
umount_vladimir
3.2 via Virtual Desktop
you can use a virtual desktop to login there first, then access the calc server.
3.2.1 Prerequisites
- VPN client (can be omitted within VLAN-168)
- vnc-client like tigervnc (former tight-vnc)
yum install tigervnc or apt-get install tigervnc-viewer or similar viewers for windows, etc.
or
- java enabled web-browser to run an unsigned applet (which normally causes troubles)
3.2.2 work-flow
- Establish a VPN tunnel to begin with.
- Make sure to be within the VPN university subnet.
- start your vnc-client
(Technically, connecting through a virtual desktop another username/password pair would be necessary.) Your username is mapped to the port:=5900+<Display> number, your password is just the same anyway.)
vncviewer 131.130.97.100:port
or - even better tunnel the session through ssh
vncviewer -via <remote-user>@calc.isor.univie.ac.at localhost:port
Best to use the Full-Screen-Mode, note the keys how to escape, e.g. <Strg> + <Alt> + <Shift> + <F> Don't forget to close the vncviewer before opening it at another host to get the geometry-settings right. Some viewers like viagre disable sending special keys by default (<Strg>+<Q> in this case). Make sure to enable them, just not to get locked out in FullScreen mode.
If you use a java-enabled web-browser and allow an unsigned applet to run, calculate your Port := 5800+<Display>
http://calc.isor.univie.ac.at:Port
Use your Virtual Linux Desktop's terminal (e.g. gnome-terminal) and continue as described in 1). Start your calculation and close the viewer. Within the VPN uni-subnet or VLAN-168 you can re-open a viewer and continue.
3.2.3 Bugs
Avoid switching to full-screen, because vnc might get into troubles.
3.3 Applications
3.3.1 Matlab
Open a terminal via e.g. Application > Favorites > Terminal. At the command-prompt put in matlab. After the licensing server is asked for authorization the GUI starts up. Don't close this terminal, since it's the controlling terminal for Matlab. Alternatively press <Alt>+<F2> and fill in matlab. You can also use matlab in text mode from the command line.
3.3.2 R studio
edit R source files in some text-editor and run it afterwards, or use rstudio. you might also want to secure-copy files in your server share and run R-studio in a web browser: http://calc.vdc.ac:8787
3.3.3 Python
some python-libs for finance have been installed on request.
